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"Simple PINE" peak list
format |
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Important Notes:
-
For a 2D experiment, the first column in simple
PINE format is an arbitrary index. The second, and third columns contain
chemical shift information. The order of nuclei is arbitrary as
PINE detects the nucleus type from the chemical shift ranges. For a 3D
experiment, the first column in simple PINE format is an arbitrary
index. The second, third, and fourth columns contain chemical shift
information for each dimension. The order of nuclei can again be arbitrary.
- The intensity (volume or peak height) information, if
provided, should be in the 7th column for a 3D experiment
(the 5th and 6th columns can be zero or any other arbitrary number ) and
in the sixth column for a 2D experiment. The volume (or intensity) information
is not mandatory but it is extremely recommended
for HNCACB experiment.
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Example
of a Simple PINE format 3D peak list
without
volume or intensity information (download as
a text file)
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1 7.995 67.594 122.178
2 8.445 67.559 119.022
3 8.439 66.085 123.648
4 8.439 66.085 113.714
5 8.178 66.050 121.389
6 6.931 65.278 103.456
7 9.314 62.436 127.593
8 7.525 62.401 125.011
9 9.418 62.366 127.737
10 8.550 62.366 120.671
11 7.140 62.366 118.914
12 8.432 62.296 121.317
13 8.641 62.155 121.819
14 7.714 61.383 109.231
15 7.545 61.313 105.931
16 8.374 61.103 113.570
17 7.558 60.927 115.005
18 7.825 60.717 121.353
19 9.098 60.647 127.127
.....
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Example
of a Simple PINE format 3D peak list
with
volume or intensity information (download as a
text file)
1 |
126.35 |
55.18 |
8.1 |
0 |
0 |
1.30E+05 |
2 |
126.35 |
50.74 |
8.1 |
0 |
0 |
4.30E+05 |
3 |
126.35 |
33.257 |
8.1 |
0 |
0 |
-1.09E+05 |
4 |
126.35 |
18.737 |
8.1 |
0 |
0 |
-2.47E+05 |
5 |
125.57 |
19.17 |
7.93 |
0 |
0 |
-67600 |
6 |
125.57 |
50.875 |
7.93 |
0 |
0 |
1.23E+05 |
7 |
124.42 |
19.037 |
8.07 |
0 |
0 |
-1.86E+05 |
8 |
124.42 |
45.346 |
8.07 |
0 |
0 |
3.02E+05 |
9 |
124.42 |
49.95 |
8.07 |
0 |
0 |
2.39E+05 |
10 |
123.5 |
63.09 |
8.33 |
0 |
0 |
2.13E+05 |
11 |
123.5 |
55.47 |
8.34 |
0 |
0 |
5.28E+05 |
12 |
123.5 |
42.316 |
8.33 |
0 |
0 |
-4.46E+05 |
13 |
123.5 |
31.592 |
8.33 |
0 |
0 |
-2.98E+05 |
14 |
123.61 |
55.037 |
7.942 |
0 |
0 |
9.68E+05 |
15 |
123.61 |
59.66 |
7.942 |
0 |
0 |
1.83E+06 |
16 |
123.61 |
32.158 |
7.94 |
0 |
0 |
-1.22E+06 |
17 |
123.61 |
42.349 |
7.94 |
0 |
0 |
-4.43E+05 |
18 |
122.52 |
45.279 |
7.905 |
0 |
0 |
6.37E+05 |
19 |
122.52 |
55.021 |
7.906 |
0 |
0 |
6.05E+05 |
...
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